Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1099384g00001 ATGGACCTTTTTAATGAATGTATGGAAATTGTTGGTAGTTGTATTACTGACTCTAAGATTGACAAGGGTAGTATAGATGATGTTGTCCTTGTTGGTGGCTCTTCTAGGATTCCCAAAGTACAGCAGCTATTAGGGGACTTTTTTAAGGGAAAGGATCTCTGCAAGAGCATCAACCCTGATGAG 183 0.3989 MDLFNECMEIVGSCITDSKIDKGSIDDVVLVGGSSRIPKVQQLLGDFFKGKDLCKSINPDE 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1099384g00001 61 ProSitePatterns Heat shock hsp70 proteins family signature 3. 28 42 IPR018181 -
Trme1099384g00001 61 SUPERFAMILY Actin-like ATPase domain 2 61 IPR043129 -
Trme1099384g00001 61 Gene3D - 7 54 - -
Trme1099384g00001 61 PRINTS 70kDa heat shock protein signature 25 41 - -
Trme1099384g00001 61 PRINTS 70kDa heat shock protein signature 57 61 - -
Trme1099384g00001 61 PANTHER HEAT SHOCK PROTEIN 70KDA 1 61 IPR013126 GO:0005524|GO:0140662
Trme1099384g00001 61 Pfam Hsp70 protein 2 61 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1099384g00001 Trme-Chr1099384 1 183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1099384g00001 1 61 Calmodulin-binding Proteins AT3G09440 75.410 1.69e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1099384g00001 K03283 - smo:SELMODRAFT_443126 102.834