Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109591g00001 ATGAATGGGGCTGCTATGTATGAACTKGTGCGTGTTGGTCGTGATAATCTCATCGGTGAAATTATTCGTTTGGAAGGGGATTCTGCCACTATCCAAGTTTACGAGGAAACTGCTGGGTTAATGGTTAACGATCCGGTGTTACGTACACACAAGCCTTTGTCTGTGGAGTTGGGACCTGGAATATTGGGGAATAT 194 0.4485 MNGAAMYELVRVGRDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGN 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109591g00001 64 Gene3D - 4 53 - -
Trme109591g00001 64 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 1 64 IPR022878 GO:0046034|GO:0046961
Trme109591g00001 64 Pfam ATP synthase alpha/beta family, beta-barrel domain 4 49 IPR004100 GO:0046034|GO:1902600
Trme109591g00001 64 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 1 53 IPR036121 GO:0046034|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme109591g00001 1 64 Primary Pumps ATPases(2) AT1G78900 95.312 6.78e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme109591g00001 K02145 - cit:102578066 127.102