Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10954g00001 GAATTAGCCTTCCTAAGCGACCTTTCACTTCTCCACCTCAATAGCAACCGTTTCTGCGGCATCATTCCAAAAACCTTCACCAACCTAACTCATCTCTATGAGCTTGACCTTAGCAACAACAGATTCGTTGGACCATTTCCTTCGGTCGTTCTTTCGCTTTCTTCCCTTACTTACCTCGACCTTCGTTACAACGAATTTGAAGGTCCATTACCTCCACAACTTTTCGACAAATCTTTCGATGCTTTTTTCCTTAACAACAATCGCTTCACAAGTTCTATTCCAAGAAATTTAGGGAAAAGCAAAGCTTCTGTCATGGTTTTCGCTAATAACAAATTTGGAGGATGTTTACCAGAAAGCATAGTAAACTTCGCCGATACTTTAGAAGAACTTCTCTTAATCAACACAAGCATTTCAGGTTGTCTTCCACAACAAGTTGGTTTTCTATACAAATTGAGAGTTTTAGATGTGAGTTTCAACAATATTGTTGGTCCTATACCTTATAGTCTTGCGGGGTTATCTCATTTGGAACAGTTAAATTTAGGACATAATATGATGAGTGGAATAGTTCCTATGGGAGTTTGTGAGTTACCAAACTTGGTTAATTTCACTTTTTCTTACAATTTCTTCTGTGAAGAAGAAGGCATTTGTAAGAATTTGACATCAAAGAACATAGTTTTTGATGATCGGCGTAATTGCTTGCCGGAGAAGGCACTGCAGAGGAGTGAAAAGGAATGTAGTGACAAACTTGAACAGCCACCAGTTGATTGCTTTGAGGTTTGTTGTGTTGAAGGTGGTTTTGGGAATAATGCTAGTGCTGGTTCTGTGGCTATTCCACCTTCTGCAATACCAGCAGCAGCAATGCCTGTTTCTGCTGCACCTCTTGTTGCACCAAGCTACCCTTGA 903 0.3998 ELAFLSDLSLLHLNSNRFCGIIPKTFTNLTHLYELDLSNNRFVGPFPSVVLSLSSLTYLDLRYNEFEGPLPPQLFDKSFDAFFLNNNRFTSSIPRNLGKSKASVMVFANNKFGGCLPESIVNFADTLEELLLINTSISGCLPQQVGFLYKLRVLDVSFNNIVGPIPYSLAGLSHLEQLNLGHNMMSGIVPMGVCELPNLVNFTFSYNFFCEEEGICKNLTSKNIVFDDRRNCLPEKALQRSEKECSDKLEQPPVDCFEVCCVEGGFGNNASAGSVAIPPSAIPAAAMPVSAAPLVAPSYP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10954g00001 300 Gene3D Ribonuclease Inhibitor 1 252 IPR032675 -
Trme10954g00001 300 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 268 - -
Trme10954g00001 300 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 96 - -
Trme10954g00001 300 Pfam Leucine rich repeat 8 65 IPR001611 GO:0005515
Trme10954g00001 300 Pfam Leucine rich repeat 150 207 IPR001611 GO:0005515
Trme10954g00001 300 SUPERFAMILY L domain-like 3 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10954g00001 Trme-Chr10954 773 1675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10954g00001 1 261 Leucine-rich Repeat extension Gene Families AT3G24480 52.107 1.21e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10954g00001 - - gmx:100802803 440.654