Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109486g00001 ATGGCTACTTTCAGGTTCCATCAGTACCAGGTTGTCGGGAGAGGTCTCCCGACGGAATCAGATCCACACCCAAAGATTTTTCGTATGAAGCTTTGGGCTACCAATGAAGTTCGT 114 0.4825 MATFRFHQYQVVGRGLPTESDPHPKIFRMKLWATNEVR 38
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109486g00001 38 PANTHER 60S RIBOSOMAL PROTEIN L18A 3 38 IPR028877 -
Trme109486g00001 38 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 7 37 IPR023573 GO:0003735|GO:0005840|GO:0006412
Trme109486g00001 38 Gene3D - 1 38 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme109486g00001 1 38 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 81.579 2.09e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme109486g00001 K02882 - twl:120001747 80.1073