Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109456g00001 ATGGGAGATGGAGCTATGAAAACTGCACCAAACTCTGAAATGATCGGAAATGATTCACAGAAGGAGAGATCTAAGCTTATAGATCTTGCATCAGCTGCTATGGATGAACTCATCAAGATGGCAGATTCTGACTCCCATCTCTGGATTAAGAGTCCAAAGAGTGGGAAGGAAGTTCTTAACCCCGTCGAATATGAAAAGATTCGTTCCCCTTTTAATACTCCGAAACCAAATGGTTTTGTAACTGAAGCTACAAGAAAGACTGTGCTGATATGCACCAACACTGCTGCACTCATCGAAACATTTCTGGATGCG 312 0.4231 MGDGAMKTAPNSEMIGNDSQKERSKLIDLASAAMDELIKMADSDSHLWIKSPKSGKEVLNPVEYEKIRSPFNTPKPNGFVTEATRKTVLICTNTAALIETFLDA 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109456g00001 104 MobiDBLite consensus disorder prediction 1 21 - -
Trme109456g00001 104 ProSiteProfiles START domain profile. 19 104 IPR002913 GO:0008289
Trme109456g00001 104 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 12 104 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme109456g00001 Trme-Chr109456 221 532 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme109456g00001 2 104 Homeobox Transcription Factor Family AT3G61150 40.777 2.47e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme109456g00001 K09338 - tpra:123905936 160.999