Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109441g00001 GGAAATTACTTGATACCAAAGGGTAGCCATGTATTGCTTGGAAGAAGTGGTCTTGGGAGAAATCCAAAAGTTTGGAGTGAACCTTACAAATTCAAACCAGAACGTCATCTCAAGAATGATAGGTCTAACATAACTTTGACAGAGCCAAATTTAAGGTTCATATCCTTTAGTACAGGAAAACGTGGTTGTCCTGCTGTTATGCTTGGGACCACAATGACTATTATGCTATTAGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCAAATCCTAATATATCAAGAATCGATCTTGTGAAGTCCAAAGATATTATATCTCTTGATGAGCCACTGAAGGTTGCAGCAAAGCCACGATTAGCAGCAAAATTGTACAACGTTTGA 378 0.3942 GNYLIPKGSHVLLGRSGLGRNPKVWSEPYKFKPERHLKNDRSNITLTEPNLRFISFSTGKRGCPAVMLGTTMTIMLLARLLHGFTWSANPNISRIDLVKSKDIISLDEPLKVAAKPRLAAKLYNV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109441g00001 125 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 56 65 IPR017972 GO:0005506|GO:0016705
Trme109441g00001 125 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 1 124 - -
Trme109441g00001 125 SUPERFAMILY Cytochrome P450 1 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme109441g00001 125 PRINTS E-class P450 group I signature 14 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme109441g00001 125 PRINTS E-class P450 group I signature 53 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme109441g00001 125 PRINTS E-class P450 group I signature 63 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme109441g00001 125 Gene3D Cytochrome P450 1 123 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme109441g00001 125 Pfam Cytochrome P450 2 110 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme109441g00001 Trme-Chr109441 2 379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme109441g00001 1 123 Cytochrome P450 AT4G39950 58.537 1.47e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme109441g00001 - K14984 gmx:100809902 192.971