Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109440g00001 AGTGGGTTTGATGCAGAAGATGTGAATGCAGATGTAAATGTTGGTGATTCTGCCGATTATGAGTATATTGTTTACGAGGAAGATGAAAGTGAGGGGGGTGAATTTGATGGCGATGAAAGTGATTTTGGTGATTGTGATGATTTTTCTAAAAGTGAGAACACAGTTGTGGACGATTTGGATGAAAATTCAGATACCGACAATGAGACTACACATTCAGATGAAAATGCAGAAGAATTATTCATAATTGATGATGCGGATGATATTGTAAAGATAGATATGTTTAACTTGAACAATGAAGATGTTTCTAAGTTGCAATTTGGTAGTTTGGAAGTTGCGTACAAATTTTATTGTTGGTTTGCAAAGATGAACGGTTTTGCTGTTCGCAAAGGGCAAGTAATTAAAAATAAAGCTGGAGATGTTGTTCAACAAACATTCATGTGTAATCTAGAAGGTTTTAGGAAAGACAGTGGGTTAACTATCGAGATGCGCATGCATGGTCCGAAACATGAAACCAGCACTGTGGCCTATTAG 531 0.3672 SGFDAEDVNADVNVGDSADYEYIVYEEDESEGGEFDGDESDFGDCDDFSKSENTVVDDLDENSDTDNETTHSDENAEELFIIDDADDIVKIDMFNLNNEDVSKLQFGSLEVAYKFYCWFAKMNGFAVRKGQVIKNKAGDVVQQTFMCNLEGFRKDSGLTIEMRMHGPKHETSTVAY 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109440g00001 176 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 35 156 - -
Trme109440g00001 176 MobiDBLite consensus disorder prediction 26 73 - -
Trme109440g00001 176 MobiDBLite consensus disorder prediction 26 43 - -
Trme109440g00001 176 Pfam FAR1 DNA-binding domain 114 163 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme109440g00001 Trme-Chr109440 2 638 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme109440g00001 FAR1 8.1e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme109440g00001 - K17604 tpra:123886745 201.06