Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1094391g00001 ATGGAAAAGTATGAGGTAGGACGCATGCTTGGTCAAGGAAATTTCGCGAAAGTTTACCATGCAAGGAACTTAAAGACAGGACAAAATGTTGCCATCAAAGTGTGTAACAAAGAAATGATCATGAGAGTCGGTATGAAGGAACAAATGAAGCGCGAAATTTCTGTGATGCATCTCGTTCGACACCCCAACATT 192 0.4115 MEKYEVGRMLGQGNFAKVYHARNLKTGQNVAIKVCNKEMIMRVGMKEQMKREISVMHLVRHPNI 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1094391g00001 64 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 64 - -
Trme1094391g00001 64 FunFam Aurora kinase A 1 64 - -
Trme1094391g00001 64 Pfam Protein kinase domain 4 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme1094391g00001 64 Gene3D Phosphorylase Kinase; domain 1 1 64 - -
Trme1094391g00001 64 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Trme1094391g00001 64 SUPERFAMILY Protein kinase-like (PK-like) 1 64 IPR011009 -
Trme1094391g00001 64 ProSiteProfiles Protein kinase domain profile. 4 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1094391g00001 Trme-Chr1094391 1 192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1094391g00001 1 64 CBL-interacting serine-threonine protein kinases AT5G01810 71.875 1.27e-27 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trme1094391g00001 Pkinase 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1094391g00001 K07198 - gmx:100807927 110.538