Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109371g00001 AAGGTTTCAACTGGTATGAAGGTCAGGATTATGGGACCAAATTACATCCCCGGGGAGAAGAAAGATCTGTATGTGAAAAGTGTTCAAAGAACGGTTATTTGGATGGGAAAGAAGCAAGAAACCGTGGAGGATGTCCCTTGTGGTAATACAGTTGCCATGGTGGGTTTAGATCAATTCATTACCAAGAATGCTACTTTAACAAATGAGAAAGAAATCGATGCACATCCTATTCGAGCTATGAAATTTTCAGTGTCACCTGTGGTAAGTGTAGCAGTTACATGCAAGGTAGCATCGGAAGTTCCCAAGCTTGTCGATGGCCTTAAACGGTTAGCGAAGTCAGATCCTATGGTGGTGTGCACAATGTCAGACACTGGAGAACATATCGTAGCTGCTGCTGGTGAGCTGCACCTTGAAATCTGCTTGAAGGATTTGCAGGATGATTTCATGAATGGAGCTGAGATTTCAATATCCGACCCTATTGTCTCTTTCCGCGAGACTGTGCTCGAGAAATCTAGCCATATTGTGATGAGCAAGTCACCAAACAGACACAACCGTTTATATATGGAAGCAAGGCCAATGGAGGAAGGGCTTGCACA 596 0.4396 KVSTGMKVRIMGPNYIPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEIDAHPIRAMKFSVSPVVSVAVTCKVASEVPKLVDGLKRLAKSDPMVVCTMSDTGEHIVAAAGELHLEICLKDLQDDFMNGAEISISDPIVSFRETVLEKSSHIVMSKSPNRHNRLYMEARPMEEGLA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109371g00001 198 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 198 - -
Trme109371g00001 198 SUPERFAMILY Ribosomal protein S5 domain 2-like 161 197 IPR020568 -
Trme109371g00001 198 CDD EF2_II 1 69 - -
Trme109371g00001 198 SUPERFAMILY Translation proteins 2 75 IPR009000 -
Trme109371g00001 198 Gene3D Translation factors 1 83 - -
Trme109371g00001 198 SUPERFAMILY EF-G C-terminal domain-like 83 159 IPR035647 -
Trme109371g00001 198 Pfam Elongation Factor G, domain III 86 148 IPR041095 -
Trme109371g00001 198 Gene3D Elongation Factor G (Translational Gtpase), domain 3 85 162 - -
Trme109371g00001 198 FunFam Translation elongation factor 2 85 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme109371g00001 Trme-Chr109371 64 659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme109371g00001 1 198 Eukaryotic Initiation Factors Gene Family AT1G56070 88.384 1.21e-124 369