Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109337g00001 GGAGGAAATGATTGGTTTGGTCCAGGTAGTAGGATCATTATAACTACAAGGGACAAAGGCTTGATCATAGGATACGAAGCCGTCCTAGATATATCTTGCTTCTTCAAAGGGAAAAGAATAGAATATGTTGAAGAGATACTTGCTGAGTTTAGTGCAACATCGAATATTGAAGAGCTTGTTAATAAATCTCTCTTGACTGTTGAACATGGATACTTGAATATGCACGATATAATACAGGACATGGGTAGGGAGGTTGTTAGGCAAGAGGCACCGAATCCAGCGAAACGTAGTAGATTATGGTTTCATCAAGATGTCATTGATGTATTATCAGCTGGCGATTCTGGAAGTGATTCAATTCAAGGGATAATGCTTGATCCTTCCCAGCATATAAAAGTAGTAGATTGGAATGGTACTGCTTTTGAGAAGATGAACCGCCTCAGAATTCTC 447 0.3937 GGNDWFGPGSRIIITTRDKGLIIGYEAVLDISCFFKGKRIEYVEEILAEFSATSNIEELVNKSLLTVEHGYLNMHDIIQDMGREVVRQEAPNPAKRSRLWFHQDVIDVLSAGDSGSDSIQGIMLDPSQHIKVVDWNGTAFEKMNRLRIL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109337g00001 149 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 149 IPR044974 GO:0006952
Trme109337g00001 149 SUPERFAMILY "Winged helix" DNA-binding domain 28 109 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme109337g00001 Trme-Chr109337 2 659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme109337g00001 29 149 WRKY Transcription Factor Family AT4G12020 44.000 9.17e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme109337g00001 - - vvo:131615864 207.223