Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109224g00001 ATGGATAGAGCAGCAATTCTTGGGGATGCGATTGAATATATAAAGGAATTGCAGAGGCAAGAGATAGAACTTCAAGATGAGGTCAAGGCTTTAGAAGTTGAGGACTGTGTGAAGAACACACTAAAATTTAGGGTGAAAAGAGACAAAGAACAAGAAGAAGGAACCAGAAGTCTACCTCTCACTGCGATTAATCAAAGTTCTTCTGATTCCACTAGAAATACACAGATGAAGGTTGATGGAAGCTATAGATTCATTTGGACTCAATGTGGTAAATGCAAACATGACCACATTTGA 294 0.3844 MDRAAILGDAIEYIKELQRQEIELQDEVKALEVEDCVKNTLKFRVKRDKEQEEGTRSLPLTAINQSSSDSTRNTQMKVDGSYRFIWTQCGKCKHDHI 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109224g00001 97 Coils Coil 14 34 - -
Trme109224g00001 97 Gene3D - 1 38 IPR036638 GO:0046983
Trme109224g00001 97 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 62 - -
Trme109224g00001 97 MobiDBLite consensus disorder prediction 47 74 - -
Trme109224g00001 97 MobiDBLite consensus disorder prediction 57 74 - -
Trme109224g00001 97 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 32 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme109224g00001 1 29 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 65.517 8.29e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme109224g00001 - - cam:101515167 120.938