Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109095g00001 TTTGAAAAGCTCGCAACTGCTACAAACAACTTCGATTTATCCAACAAACTTGGACAAGGAGGTTTTGGTCCTGTATACAAGGGAATACTGCAAGATGGTAAGGAAATTGCGGTTAAAAGACTTTCTAGATCATCTGGACAAGGGCTAGAAGAATTCATGAATGAAGTAGTAGTGATTTCTAARCTTCARCATCGCAATCTTGTAAGACTTTTAGGCTGTTGTATTGAAGGAGACGAAAAGATGTTGATGTATGAGTACATGCAAAATAGAAGTTTGGATGCATATGTTTTTGGTTAG 297 0.367 FEKLATATNNFDLSNKLGQGGFGPVYKGILQDGKEIAVKRLSRSSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLMYEYMQNRSLDAYVFG 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109095g00001 98 Pfam Protein tyrosine and serine/threonine kinase 13 96 IPR001245 GO:0004672|GO:0006468
Trme109095g00001 98 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 97 - -
Trme109095g00001 98 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Trme109095g00001 98 ProSiteProfiles Protein kinase domain profile. 11 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme109095g00001 98 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 86 - -
Trme109095g00001 98 SUPERFAMILY Protein kinase-like (PK-like) 3 97 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme109095g00001 Trme-Chr109095 63 440 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme109095g00001 1 98 Receptor kinase-like Gene Family AT4G21400 62.245 6.79e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme109095g00001 PK_Tyr_Ser-Thr 8.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme109095g00001 - - tpra:123892367 178.333