Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme109024g00001 ATGGGTCAACCAAGCTATTCTAAGGGAATTGTGAAGCATTCTAAGGATGAGGATGAGGATGAGGATAAGGGCAATGGTCAGTCGACCAAAATACCTATGGATATGGAACTCGCGAAGTTGGGATTTTCTGTGGTGGTTGCGAAGTCGGACAATAGGGGTAAAAATAGAAAACCTTTTGTTGTGATGGGATGTCAAAGAGGTGGCACTCATAGGGCCTATGTCAACAAGAAANNNNAAGCCACGACAACATTAAAATGCAATTGTCCGTTTAGGATTAGAAGTTATTTTCTGAGCTGTGGAGAGTGGAGTGTTAATGTGATCGACGGGACACACAATCACATAATGGCAAAAAGGCTTGAAGGTCACAAGTATACGGAGCGGCTAAAGGCGGATGAGGGG 399 0.4361 MGQPSYSKGIVKHSKDEDEDEDKGNGQSTKIPMDMELAKLGFSVVVAKSDNRGKNRKPFVVMGCQRGGTHRAYVNKKXXATTTLKCNCPFRIRSYFLSCGEWSVNVIDGTHNHIMAKRLEGHKYTERLKADEG 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme109024g00001 133 Pfam Transcription factor AFT 37 114 IPR014842 GO:0000981|GO:0036086
Trme109024g00001 133 MobiDBLite consensus disorder prediction 10 27 - -
Trme109024g00001 133 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme109024g00001 Trme-Chr109024 63 545 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme109024g00001 AFT 1.8e-05 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme109024g00001 - - tpra:123922220 107.071