Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme108963g00001 ATGTGTAAGGCTGTTGTTGTTTCTGTAAACTACCGGCGATCACCCGAGCATCGGTATCCGTGTGCTTACGAAGACGGGTGGAATGCTCTCAATTGGGTTAAGTCAAGGACATGGCTTCAAAGTGGAAAGGATTCTAAGGTTTATGTTTACATGGCTGGCGATAGTTCCGGCGGTAACATTGCTCATCATGTTGCGGTGAGGGCTGCTGAGGAAGATGTCGAGGTACTAGGTAATATTCTTCTCCATCCACTTTTCGGTGGGGAGAAGCGTACGGAATCAGAGAAGAAACTGGATGGAAAGTATTTCGTGAAGTTGCAAGATCGCGATTGGTATTGGAGAGCTTTTCTACCTGAAGGGGAAGATAGAGATCACCATGCTTGTAATCCATTTGGACCTAAAGGTAAAAGCCTTAAAGGACTTAAGTTCCCTAAAAGCCTTGTTTGTGTGGCCGGTTTGGATCTTCTACAAGATTGGCAATTGGAATATGCCGAAGGTCTCAAGAATTATGACCATGATGTCAAACTTCTTTACCTAAAGGAAGCTACTATTGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATTGCCTCATGAATGAGATAAACGCCTTC 612 0.4346 MCKAVVVSVNYRRSPEHRYPCAYEDGWNALNWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPLFGGEKRTESEKKLDGKYFVKLQDRDWYWRAFLPEGEDRDHHACNPFGPKGKSLKGLKFPKSLVCVAGLDLLQDWQLEYAEGLKNYDHDVKLLYLKEATIGFYFLPNNDHFYCLMNEINAF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme108963g00001 204 Gene3D alpha/beta hydrolase 1 204 IPR029058 -
Trme108963g00001 204 Pfam alpha/beta hydrolase fold 2 186 IPR013094 GO:0016787
Trme108963g00001 204 SUPERFAMILY alpha/beta-Hydrolases 4 195 IPR029058 -
Trme108963g00001 204 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 49 61 IPR033140 -
Trme108963g00001 204 PANTHER ARYLACETAMIDE DEACETYLASE 2 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme108963g00001 Trme-Chr108963 8 619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme108963g00001 1 204 Carbohydrate Esterase AT3G63010 79.412 9.28e-126 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme108963g00001 K14493 - gmx:100812133 379.022