Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme108870g00001 TTACCAGTATTGGACATGATGTGGGATTTGGCTTTGCCTAAGGAGACAGATCGTGACCATAGGTATTGCAATCCAATGGTGCAAGGGCCACATTTGGAAAATGTCAAGAAATTAAAGAGATGTCTTATTATTGGGTATGGTGGAGACATCATGGTTGATCGACAACAAGAATTTGTGACCATGTTGGTCAAATGTGGGGTCCAGGTTGAAGCTCGTTTTGATCCTGTAGGGTTCCATAATATTGATATGGTGGACCCTGCTAGAGCTAGTGCAGTTMTAAATATTGTAAGGGAGTTTATACTTTGA 306 0.4085 LPVLDMMWDLALPKETDRDHRYCNPMVQGPHLENVKKLKRCLIIGYGGDIMVDRQQEFVTMLVKCGVQVEARFDPVGFHNIDMVDPARASAVJNIVREFIL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme108870g00001 101 SUPERFAMILY alpha/beta-Hydrolases 2 100 IPR029058 -
Trme108870g00001 101 Pfam alpha/beta hydrolase fold 4 80 IPR013094 GO:0016787
Trme108870g00001 101 Gene3D alpha/beta hydrolase 1 101 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme108870g00001 Trme-Chr108870 2 307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme108870g00001 5 69 Carbohydrate Esterase AT3G63010 35.821 1.72e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme108870g00001 - - ccaj:109802332 180.259