Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme108815g00001 CTTTCATTACCAAGCGGCACTACTGCAGCTTTGGTAGGGCAAAGTGGGAGTGGGAAATCCACGGTCGTTAGTTTGATAGAGAGATTCTATGATCCAACGGATGGCGAAGTTCTCATTGATGGCATCAACCTCAAAGAATTTCAACTGAAATGGATTAGACAGAAAATAGGCCTGGTCAGCCAAGAACCCGTTCTCTTTACTTGCAGCATTAAGGAGAATATTGCCTATGGCAAAGATGGTGCAACTGATGATGAAATCAGAGCTGCAGCAGAACTTGCTAATGCTGCAAAATTTATAGATAAACTTCCTCAGGGACTAGACACAATGGTTGGTGAGCATGGAACTCAGCTCTCAGGAGGTCAAAAGCAAAGAGTGGCAATCGCAAGAGCAATCTTGAAAGATCCAAGAATCCTACTTCTTGATGAAGCTACAAGTGCC 438 0.4384 LSLPSGTTAALVGQSGSGKSTVVSLIERFYDPTDGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDDEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme108815g00001 146 Gene3D - 1 146 IPR027417 -
Trme108815g00001 146 PANTHER ABC TRANSPORTER B FAMILY 1 146 IPR039421 -
Trme108815g00001 146 Pfam ABC transporter 1 145 IPR003439 GO:0005524
Trme108815g00001 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme108815g00001 Trme-Chr108815 1 660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme108815g00001 1 146 Calmodulin-binding Proteins AT2G36910 69.863 5.44e-62 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme108815g00001 K05658 - gmx:100800293 264.618