Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10867g00001 GTTTATGATGTGACAAAGTTCTTAGAGGACCACCCTGGTGGTGATGAAGTCCTAATATCTTCGACAGGGAAAGATGCATCCAATGATTTTGACGATATCGGTCACAGCACAAGTGCAGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNATCCCTTCTAAGGTTGACTACACTCCTCCGAAACAACCTCACTATAATCAAGACAAGACGTCCGAGTTCATCATCAGGATCCTCCAATTTCTAGTTCCTGTGCTTATCTTGGGTTTGGCAGTTGGTATTCGTTTCTACACCAAATCGACATAA 318 0.3679 VYDVTKFLEDHPGGDEVLISSTGKDASNDFDDIGHSTSAXXXXXXXXXXXXXXXXIPSKVDYTPPKQPHYNQDKTSEFIIRILQFLVPVLILGLAVGIRFYTKST 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10867g00001 105 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 7 14 IPR018506 GO:0020037
Trme10867g00001 105 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 1 41 IPR036400 -
Trme10867g00001 105 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 57 IPR001199 -
Trme10867g00001 105 Gene3D - 1 45 IPR036400 -
Trme10867g00001 105 PRINTS Cytochrome B5 signature 1 11 IPR001199 -
Trme10867g00001 105 PRINTS Cytochrome B5 signature 11 25 IPR001199 -
Trme10867g00001 105 PRINTS Cytochrome B5 signature 26 33 IPR001199 -
Trme10867g00001 105 PANTHER CYTOCHROME B5 1 102 - -
Trme10867g00001 105 Pfam Cytochrome b5-like Heme/Steroid binding domain 1 39 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10867g00001 Trme-Chr10867 997 1432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10867g00001 1 104 NADPH P450 reductases AT2G32720 70.192 2.04e-49 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10867g00001 K23490 - gmx:100500611 164.081