Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme108524g00001 ATGGCGAAGATTCGGGAAGAGATAGCTGTTCAGAAAGCAAAGGAAACAGAACTGAATAAAACCATTCACATTACAGAGGAAACTATGAGAGCGAAACAAGTGCTAGCAACAATGTCACACGAGATAAGATCACCACTGTCTGGTGTTGTTAGTATGGCTGAAGTTCTTTCGACCACAAAACTTGATAGAGAACAAAGAGAGCTCTTGGATGTCATGTTATCGTCAGGYGATATGGTTCTTCAAATTATAAATGACATACTTGATCTTTCCAAGGTTGAATCAG 283 0.3922 MAKIREEIAVQKAKETELNKTIHITEETMRAKQVLATMSHEIRSPLSGVVSMAEVLSTTKLDREQRELLDVMLSSGDMVLQIINDILDLSKVES 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme108524g00001 94 ProSiteProfiles Histidine kinase domain profile. 37 94 IPR005467 -
Trme108524g00001 94 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 1 94 - -
Trme108524g00001 94 SMART HisKA_10 30 94 IPR003661 GO:0000155|GO:0007165
Trme108524g00001 94 FunFam Putative histidine kinase 5 18 94 - -
Trme108524g00001 94 Gene3D - 1 93 - -
Trme108524g00001 94 CDD HisKA 32 91 IPR003661 GO:0000155|GO:0007165
Trme108524g00001 94 Pfam His Kinase A (phospho-acceptor) domain 33 94 IPR003661 GO:0000155|GO:0007165
Trme108524g00001 94 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 25 94 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme108524g00001 Trme-Chr108524 214 589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme108524g00001 1 94 Histidine Kinase Gene Family AT5G10720 84.043 1.91e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme108524g00001 - - tcc:18587650 170.629