Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme108483g00001 AGACAATTCAACGGTCTTATTGATGTCTACAAGAAGACATTGGCAACTGATGGTATTGCTGGACTTTACCGTGGTTTCAACATTTCATGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTTGGAATGTATGATTCCTTGAAGCCAGTTCTCCTAACTGGATCTTTGCAGGATAGTTTCTTCGCTAGTTTTGGACTTGGATGGCTCATCACCAATGGTGCAG 223 0.417 RQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGA 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme108483g00001 74 PRINTS Mitochondrial carrier protein signature 67 74 IPR002067 GO:0055085
Trme108483g00001 74 PRINTS Mitochondrial carrier protein signature 23 41 IPR002067 GO:0055085
Trme108483g00001 74 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 74 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme108483g00001 74 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 50 IPR018108 -
Trme108483g00001 74 Gene3D Mitochondrial carrier domain 1 74 IPR023395 -
Trme108483g00001 74 SUPERFAMILY Mitochondrial carrier 1 69 IPR023395 -
Trme108483g00001 74 Pfam Mitochondrial carrier protein 3 53 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme108483g00001 Trme-Chr108483 9 661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme108483g00001 1 74 Antiporters AT5G13490 89.189 3.07e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme108483g00001 K05863 - gmx:100793257 151.369