Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme108435g00001 ACACAAGAGGAAGCGGCTGAAGCCTACGACATAGCGGCTATAAAATTCCGAGGAGCTAATGCAGTAACCAACTTTGATATCATAAAATATGATGTTGAAAAAATCATGGCAAGTAGTAATCTTCTTAGCATTGATCTAGCTAGAAGAAACAAAGAGGTTGTCGATACAACTCAACACATTGATCAAAACAAGCCTAATTCTTCTGCATATGACAACAACACTCAAGAAGCAATTTTAATGCAGAAGAATATGGTTCTGTATCAATCCTCTCAACAACAGAATCAACCAAGAATTGAGAATGAAAGAACTCATCAATCTTTTTCATCGGTATCTTTTGATAACATGTTTCATCAAGAAGTAGTAGAGGAAGCAAGTAAGATGAGAACACATGTATCAAATGCTTCTTCATTGGCTACAAGTTTGAGCAGTTCAAGGGAAGGTAGTCCTGATAGAACAAGCTTGCAAAATCTCTCTGGAATAATGCCTTCAACAGGTTCTAAACTATTGGCTACTAATGCTCCAAATAGTAATGTGAATTCTTGGGACCCTTCACATCATCTTAGGACTCAGATGCCAGTTTTTGCTGCTTGGACTGATG 598 0.3746 TQEEAAEAYDIAAIKFRGANAVTNFDIIKYDVEKIMASSNLLSIDLARRNKEVVDTTQHIDQNKPNSSAYDNNTQEAILMQKNMVLYQSSQQQNQPRIENERTHQSFSSVSFDNMFHQEVVEEASKMRTHVSNASSLATSLSSSREGSPDRTSLQNLSGIMPSTGSKLLATNAPNSNVNSWDPSHHLRTQMPVFAAWTD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme108435g00001 199 ProSiteProfiles AP2/ERF domain profile. 1 26 IPR001471 GO:0003700|GO:0006355
Trme108435g00001 199 Gene3D AP2/ERF domain 1 28 IPR036955 GO:0003700|GO:0006355
Trme108435g00001 199 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 114 - -
Trme108435g00001 199 MobiDBLite consensus disorder prediction 136 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme108435g00001 Trme-Chr108435 65 662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme108435g00001 1 67 AP2-EREBP Transcription Factor Family AT4G37750 62.687 1.60e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme108435g00001 K09285 - gmx:100787611 249.595