Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10827g00001 ATGTGCGATGAAGAAGATGAAGATAGAGACAAAAGCAAAGCCCTACGTTACAAAATAGCGGCTTTAGTATCGATACTAGTTGCAAGTGCAATTGGTGTTTGCATTCCACTTCTTGGAAAAGTGATACCNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNATCAAAGCCTTTGCTGCCGGTGTGATATTGTCCACCGGTTTCATTCATGTCCTTCCCGATGCTTTTGAGAATCTCACTTCACCTTGTTTAAATGAACATCCTTGGGGTGATTTTCCGTTCACCGGTTTTGTGGCTATGTGCACCGCTATGGGGACTCTTATGGTTGATACTTATGCCACTGCTTATTTTCAGAACCATTATACTAAAAATGCACCGACACAAGTTGAGAGTCATGATCATGAGGCAACCTCAGATGTGGAGAAGGATGCGGAGCATGAAGGACATGTGCATGTTCATACTCATGCATCACATGGTCATGCACATGGCCCT 492 0.4065 MCDEEDEDRDKSKALRYKIAALVSILVASAIGVCIPLLGKVIPXXXXXXXXXXXIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQNHYTKNAPTQVESHDHEATSDVEKDAEHEGHVHVHTHASHGHAHGP 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10827g00001 164 MobiDBLite consensus disorder prediction 127 154 - -
Trme10827g00001 164 Pfam ZIP Zinc transporter 16 155 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trme10827g00001 164 PANTHER ZINC/IRON TRANSPORTER 14 149 - -
Trme10827g00001 164 MobiDBLite consensus disorder prediction 127 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10827g00001 Trme-Chr10827 1 492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10827g00001 3 163 Inorganic Solute Cotransporters AT3G12750 48.447 3.75e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10827g00001 K14709 - gmx:547695 209.92