Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme108108g00001 TCTTCTTTGCAACGCCTTCCCTCGGTTGGTCCTAGCTTAGGACGCCAATCAAGCATAAGCTACTCAAGAGAATTATCGCGTACGGGAACAAGCATTGGTGGTAGTTTTCGATCGGATAAAGACTCAATTGGCCGTGTTGGTGGTGAGGATGGAAACAAGTCAAATCATGTTTCAGCAAAAAGACTATATTCTATGATTGGTCCTGATTGGCCTTATGGAGTTATTGGAACCTTATGTGCATTTGTTGCTGGAGCACAAATGCCTCTTTTTGCACTCGGAATCTCTCATGCTCTTGTATCATATTATATGGATTGGGAAACAACGCAACGGGAAGTTAAAAAAATTGTTTTCCTCTTCTGTGGAGGTGCAGTTATAACTGTCACAGTCCATGCCATTGAACATCTTTTTTTCGGAATCATGGGCGAGCGACTTACCCTTCGTGTGCGAGAAAAGATGTTTACCGGTAATTTTAATGAACTTATTAATACCTTTCTATGTAGTGTTTCCTTTCGATATTTTTAG 522 0.408 SSLQRLPSVGPSLGRQSSISYSRELSRTGTSIGGSFRSDKDSIGRVGGEDGNKSNHVSAKRLYSMIGPDWPYGVIGTLCAFVAGAQMPLFALGISHALVSYYMDWETTQREVKKIVFLFCGGAVITVTVHAIEHLFFGIMGERLTLRVREKMFTGNFNELINTFLCSVSFRYF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme108108g00001 173 MobiDBLite consensus disorder prediction 1 37 - -
Trme108108g00001 173 SUPERFAMILY ABC transporter transmembrane region 56 154 IPR036640 GO:0005524|GO:0016020
Trme108108g00001 173 Gene3D ABC transporter type 1, transmembrane domain 15 158 IPR036640 GO:0005524|GO:0016020
Trme108108g00001 173 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme108108g00001 Trme-Chr108108 1 623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme108108g00001 11 155 Calmodulin-binding Proteins AT2G36910 32.667 2.79e-13 65.1