Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme108085g00001 TGTCGGAAAGAGGACCTGCACTTGGTAGAGAATGTGTTGGATTCAGCTGCTAAGGAGTATGCTGAAAAGGCAAATGTTCATGTACCTGAGATTGTTGTTGATAAGGATGTCTATCTTCCACCTGCCCCCAGCCATCACAATCCCCATGATCTCCACTGGGAATTGTCATGGAAGTGTCTAGCTCTGTTAGTCAAGGGCTTGCATCTAGTTCTGTCACTGGTCGAACTTGTTTCACTTGATTGGTTGTGTTGTGATATTATCTTTAGCTCTGGAGGTGTGGTATTGGCTTCTCATGATGGAAAGATTGTGTTTGAAAATACACTTGATGCGCGTTTGGATGTAGTGTTCCGGAACAAACTCCCTGAG 366 0.4454 CRKEDLHLVENVLDSAAKEYAEKANVHVPEIVVDKDVYLPPAPSHHNPHDLHWELSWKCLALLVKGLHLVLSLVELVSLDWLCCDIIFSSGGVVLASHDGKIVFENTLDARLDVVFRNKLPE 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme108085g00001 122 Gene3D - 1 122 IPR038495 -
Trme108085g00001 122 Pfam ATP synthase (E/31 kDa) subunit 89 122 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trme108085g00001 122 Pfam ATP synthase (E/31 kDa) subunit 1 39 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trme108085g00001 122 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 122 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trme108085g00001 122 SUPERFAMILY V-type ATPase subunit E-like 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme108085g00001 Trme-Chr108085 34 580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme108085g00001 1 121 Primary Pumps ATPases(2) AT4G11150 48.760 2.26e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme108085g00001 K02150 - qsa:O6P43_021011 132.494