Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107981g00001 ATGTTGCAGAAAGTATATGATTATGACACATTTTCTGCTGATGATATAATGGGAGAAGCGGACATTGATCTTCAGTCACTGATAACATCTGCCATGGCATTTAGAGATCCTGGTATCTTTGGAAATATGCAGATCGGAAAATGGTTGAAATCTGACGACAATGCACTTATTGAGGATAGCCCAGTCGAAATTTCTGATGGTAAGGTTAAACAAATGATGACACTCAAACTCCAGAATGTTGAATCTGGAGAAATAGAGTTAGAACTCGAATGGATTCCTCTTGATCAATAG 291 0.378 MLQKVYDYDTFSADDIMGEADIDLQSLITSAMAFRDPGIFGNMQIGKWLKSDDNALIEDSPVEISDGKVKQMMTLKLQNVESGEIELELEWIPLDQ 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107981g00001 96 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 4 96 IPR044518 GO:0005096|GO:0005543
Trme107981g00001 96 Gene3D C2 domain 2 96 IPR035892 -
Trme107981g00001 96 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 94 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107981g00001 Trme-Chr107981 9 299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107981g00001 4 96 C2H2 Transcription Factor Family AT4G21160 76.344 8.52e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107981g00001 K12486 - gmx:100810806 164.081