Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10796g00001 ATGCAACGTAGTTACTTCATTATAGTACTCTTTGTATCGGACCTGTATTTTCCCGGCTTCAAGGAATTATTCTTCGTGCACCCTGCCTTTGAATTTTCAAATGCTTCGAATAGGTTTACAGCCTCCTTCTTCCACTCCGAAACCTCCTTTTTCGTCAATCATCTCTTCTTTGCTACTGAAACTAAATTAAGGCCAATTATTCCTCCAGACTGCCCACCTGCAATGCGAGCTTTAATCGAGCAATGTTGGTCGTTGCAACCAGATAAGAGGCCTGATTTCTGGCAAATCGTCAAGGTGTTGGAGCAATTTGAATCTTCTATTGCCCGTGACGGAACCCTGAGTCTGGTGCAGAACCCTCGTTGTTGCCAAGATCAAAAGAAAGGACTTCTTCATTGGATTCAAAAGCTTGGTCCTGTTCAAAATAGTGGCCCTAAGCCTAAACCAAAGTTCACATGA 456 0.432 MQRSYFIIVLFVSDLYFPGFKELFFVHPAFEFSNASNRFTASFFHSETSFFVNHLFFATETKLRPIIPPDCPPAMRALIEQCWSLQPDKRPDFWQIVKVLEQFESSIARDGTLSLVQNPRCCQDQKKGLLHWIQKLGPVQNSGPKPKPKFT 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10796g00001 151 Gene3D Transferase(Phosphotransferase) domain 1 20 126 - -
Trme10796g00001 151 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 61 105 - -
Trme10796g00001 151 Pfam Protein tyrosine and serine/threonine kinase 59 100 IPR001245 GO:0004672|GO:0006468
Trme10796g00001 151 SUPERFAMILY Protein kinase-like (PK-like) 54 109 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10796g00001 52 140 MAP Kinase Kinase Kinase AT5G58950 59.551 3.83e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme10796g00001 PK_Tyr_Ser-Thr 1.3e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10796g00001 - - vvo:131644953 164.081