Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107958g00001 ATGCAATCGGTTCCTAAGGGATGGACTCACAGTAATGAGGAAAGATCATTGAAAATAGGAGTACCTTCCAAAGGTGCCTTTACTCAGTTTGTGAATGTAACACAAGACAAGAGTATGAACGGATCTTCAATCACTGGTTTCTCTATTACTGTCTTTAAAGAAGCTGTCAAACTTCTACCTTATGATTTACATTACAATTTTGTTCCTTTCAATGGCTCATACGATGAAATGGTTCATCAGGCACTGGATGGTGCGGTTGGTGATACAGGGATAATGGCATATAGATATAATTTAGTTGACTTCTCAC 307 0.3811 MQSVPKGWTHSNEERSLKIGVPSKGAFTQFVNVTQDKSMNGSSITGFSITVFKEAVKLLPYDLHYNFVPFNGSYDEMVHQALDGAVGDTGIMAYRYNLVDFS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107958g00001 102 SUPERFAMILY Periplasmic binding protein-like II 4 102 - -
Trme107958g00001 102 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 5 102 IPR015683 -
Trme107958g00001 102 Gene3D - 9 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107958g00001 Trme-Chr107958 1 585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107958g00001 4 102 Ion Channels AT5G11180 45.455 3.34e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107958g00001 - - gmx:100778941 152.91