Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107955g00001 GTGGACAATAAATTGCAAGAGATAGTCAGCCATGCAGTAGAGCTCCTTCCAGAGCTTTGGAAACAAGGTGGTTGCTATGACGAGGCAATCTCGGCTTATAGGCGTGCCCTTCTTAGTCAATGGAACCTCGACAATGATTGTTGTTCAAGAATTCAGAAATCGTTTGTTGTTTTTCTTCTGTACAGTGGTGTGGAGGCAAGTCCGCCTAGTTTAGCCGTTCAGATTGACGGTTCTTATGTTCCTAAAAATAATCTCGAAGAGGCGATTCTTCTTCTAATGATTCTTATAAGAAAGTTTTGTGCTGGTAAGATAAAATGGGATCCTTCAATTATGGAACACCTAACTTTTGCACTTTCTTGCTTTGAGTCTGCTAAGGAAGTCCTTGCACAAACATGA 396 0.4116 VDNKLQEIVSHAVELLPELWKQGGCYDEAISAYRRALLSQWNLDNDCCSRIQKSFVVFLLYSGVEASPPSLAVQIDGSYVPKNNLEEAILLLMILIRKFCAGKIKWDPSIMEHLTFALSCFESAKEVLAQT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107955g00001 131 PANTHER PROTEIN NPG1 2 130 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107955g00001 Trme-Chr107955 2 519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107955g00001 1 130 Calmodulin-binding Proteins AT2G43040 77.099 6.50e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107955g00001 K21843 - gmx:100814609 218.009