Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107938g00001 ATGTACAAGATTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGAGAATGTCGGTNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNAGTGTTATGTTTGAAAGACTTGCCAAGAATGGTAGAGAGTTTGAAGAGAAAACCATGGAACATGTGCATGAATATGCTGATGCAGGTCTAAGAACCCTTATACTTGCCTATCGTGAACTTGAAGCAGAAGAATACAAGGATTTTGCAAACAAATTCTCTGAGGCCAAGAATTTAATTAGTGCGGACCGGGAAAGACTGATTGAGGAAGTGTCGGATAATATTGAGAAGAACCTAATCCTTCTTGGTGCCACTGCTGTTGAGGATAAGCTCCAAAATGGGGTGAGTTAG 396 0.346 MYKILNVLEFNSSRKRMSVXXXXXXXXXXXXXXXXXSVMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELEAEEYKDFANKFSEAKNLISADRERLIEEVSDNIEKNLILLGATAVEDKLQNGVS 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107938g00001 131 Gene3D - 1 124 IPR023299 GO:0000166
Trme107938g00001 131 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 130 - -
Trme107938g00001 131 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 130 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107938g00001 Trme-Chr107938 140 640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107938g00001 1 131 Primary Pumps ATPases AT1G68710 67.176 2.97e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107938g00001 K01530 - gmx:100792960 186.422