Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107895g00001 ATGAACCATAATCAAGTTCAATTCTCGGAGAATCCTTCGTTCTTTGTTCCATTGCCATATCCTCAAGTGCAAGAGCAACAAGTTTTCTCTCAGAATCAGTTGAAACGGCCGCTTTTCGACANNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTCATCATCATCTGCAGCAGCATGAACAACAACAGCAATCATCGGTTGTTCCGTTTACGAAGCAGCAGAAGGTGAGTTCTACTATTGCCGGAGACGACGCAAGCAACCAGCTTCAGCAGAGTATATTTGATCAACTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCAATTGGTAAGCCTTTTGAAAGGGCTTCTTTCTATGTGAAGGAAGCCTTACAGTTAATGCTTCATTCGAACGGTAACAATCTCAATGCTTTTTCACCGATTAGTTTCATATTCAAAATCGGAGCTTACAAGTCTTTTTCCGAGATATCGCCTGTTCTTCAGTTCGCCAACTTTACTTGTAA 626 0.3562 MNHNQVQFSENPSFFVPLPYPQVQEQQVFSQNQLKRPLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHLQQHEQQQQSSVVPFTKQQKVSSTIAGDDASNQLQQSIFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFERASFYVKEALQLMLHSNGNNLNAFSPISFIFKIGAYKSFSEISPVLQFANFTC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107895g00001 208 ProSiteProfiles GRAS family profile. 108 208 IPR005202 -
Trme107895g00001 208 MobiDBLite consensus disorder prediction 69 90 - -
Trme107895g00001 208 Pfam GRAS domain family 119 207 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107895g00001 Trme-Chr107895 1 626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107895g00001 116 207 GRAS Transcription Factor Family AT4G00150 65.591 3.70e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme107895g00001 GRAS 1.4e-13 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107895g00001 - - psat:127101146 253.062