Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107851g00001 ATGTTACGACGTGAAGAGGATCCGTTAAAATGGGACGAGGCGGCGGAGGCGTTGAAGGGGAGCCATTTTGAGGAAGTGAAGAGGATGGTGGAAGATTATAGGAAGGAGGTTGTGTGGGTGGGAGGGGAGAAATTGAGGGTGGGGGAGGTGGCAGCGGTGGCTGGGAGGATGGCGGCGGTGGAGCTAAATGAGGAGGCAAGGGTTAGAGTTAAGGAGAGTAGTGAGTGGGTGATGGAGAGTGTTCATAAGGGTACTGATTGTTATGGTGTCACTACTGGTTTTGGTTCAACCTCTCATAGAAGAACTACTCAAG 313 0.5176 MLRREEDPLKWDEAAEALKGSHFEEVKRMVEDYRKEVVWVGGEKLRVGEVAAVAGRMAAVELNEEARVRVKESSEWVMESVHKGTDCYGVTTGFGSTSHRRTTQ 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107851g00001 104 PANTHER HISTIDINE AMMONIA-LYASE 6 104 IPR001106 -
Trme107851g00001 104 SUPERFAMILY L-aspartase-like 6 102 IPR008948 GO:0003824
Trme107851g00001 104 Gene3D - 2 104 IPR024083 -
Trme107851g00001 104 Pfam Aromatic amino acid lyase 45 102 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107851g00001 Trme-Chr107851 30 342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107851g00001 7 104 Monolignol Biosynthesis Gene Families AT3G10340 69.000 2.01e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107851g00001 K10775 - tpra:123898450 199.134