Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107726g00001 GCATGCAAACATTTTGATGAAAGTTGGTGTCCGAAGTTTACTTTGATTGTTGCTCAGAAGAATCACCATACTAGGTTCTTTAAACCTCATGCTCCTCAAGAAAATGTTTCACCTGGAACTGTTATTGATAACAATATATGTCATCCTAAAAACAATGACTTCTACTTGTGTGCTCATGCTGGCAAGATTGGTACAACTCGTCCTACTCATTACCATGTTCTATACGATGACATTGGATTCTCACCAGATAATTTGCAAGAACTAGTTCATTCTCTATGTTATGTGTAA 288 0.3646 ACKHFDESWCPKFTLIVAQKNHHTRFFKPHAPQENVSPGTVIDNNICHPKNNDFYLCAHAGKIGTTRPTHYHVLYDDIGFSPDNLQELVHSLCYV 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107726g00001 95 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 95 - -
Trme107726g00001 95 Pfam Piwi domain 1 95 IPR003165 GO:0003676
Trme107726g00001 95 Gene3D - 1 95 IPR036397 GO:0003676
Trme107726g00001 95 ProSiteProfiles Piwi domain profile. 1 95 IPR003165 GO:0003676
Trme107726g00001 95 SUPERFAMILY Ribonuclease H-like 1 94 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107726g00001 Trme-Chr107726 270 659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107726g00001 1 94 Eukaryotic Initiation Factors Gene Family AT1G48410 47.525 7.91e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107726g00001 K11593 - cave:132163279 170.244