Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107549g00001 CATAATAAATACCAAGAATTCATAGCAGCGAATGAACAACTTGAAGATGATAGTAACTTGTTGACTTACATTGTTCATGTCAACAAGCCTTCTCTTCAATCTAAGGAGAGTTTGCATGGTTGGTATCATTCACTCTTGCCAGATACTACCAAGCGCGTTATTTTCTCATACCAAAACATAGTTGATGGATTTGCGGTGAAATTGACCGCGGAAGAAGCCAAGGCTCTAGAAGAGAAGGAGGAGGTTTTGTCAACTCGACCGGAGAAAATCTTTTCATTACACACAACTCATACTCCGAGTTTCTTGGGGTTGCAACAGAATCAAGAATTGTGGCAAAATTCTAATCTCGGTAAAGGGATTATAATTGGAGTCCTGGACACAGGAATATACCCTTTGCATCCTTCTTTTTCTGACGAAGGAATGCCGTCTCCACCTGCAAAATGGAATGGTCATTGTGAGTTCACAGGGAAGAGGAT 476 0.4097 HNKYQEFIAANEQLEDDSNLLTYIVHVNKPSLQSKESLHGWYHSLLPDTTKRVIFSYQNIVDGFAVKLTAEEAKALEEKEEVLSTRPEKIFSLHTTHTPSFLGLQQNQELWQNSNLGKGIIIGVLDTGIYPLHPSFSDEGMPSPPAKWNGHCEFTGKR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107549g00001 158 Gene3D Peptidase S8/S53 domain 95 158 IPR036852 GO:0004252|GO:0006508
Trme107549g00001 158 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 122 133 IPR023827 -
Trme107549g00001 158 Pfam Peptidase inhibitor I9 22 94 IPR010259 -
Trme107549g00001 158 SUPERFAMILY Subtilisin-like 23 142 IPR036852 GO:0004252|GO:0006508
Trme107549g00001 158 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 154 IPR045051 -
Trme107549g00001 158 ProSiteProfiles Serine proteases, subtilase domain profile. 101 158 - -
Trme107549g00001 158 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 7 94 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107549g00001 Trme-Chr107549 190 665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107549g00001 20 153 Subtilisin-like Serine Gene Family AT3G14067 46.479 6.72e-35 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107549g00001 - - tpra:123904708 251.136