Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107517g00001 GATGAATCAGGTCTCAAAAAACAATCACAAAACCAAAAGAACAAGAGAATCAAGAGCCGTCCGACGAATGAAGCTGATAATGGAGATGCAGCTATTGAAGGGCCAGTGGTTAGAAAACCTGGTGGCAACAAGAAAGGTTCAGCTAAGGCCAATGGAAATAACAGTAGCAATGGAAACAACAAGGATGGTAGGTGGGCTGAGGAGTTGCTCAACCCTTGTGCTGCAGCCATAACTGGTGGAAATCTGAATCGCGTGCAACATCTCTTATATGTTCTTCATGANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNAGCACTGACACACCATCTATCTTCATCTTCATCATCTACCACATCAGGGACTATAACTTTTGCATGTACAGAACCGCGATTCTTCCAAAAGTCGTTACTGAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATCCTTCAAGTCCTAGCTGAAGAGCCGAACAATTCACGTTCTCTTCACATCCTTGACATTGGAGTCTCTCATGGGGTGCAGTGGCCAACTTTTCTAGAGGCCTTGAGTCGTCGACCTGGTGGACCTCCTCCTCTGGTTCGCCTCACTGTGGTTACTGCTTCATCAACTGAAA 664 0.4142 DESGLKKQSQNQKNKRIKSRPTNEADNGDAAIEGPVVRKPGGNKKGSAKANGNNSSNGNNKDGRWAEELLNPCAAAITGGNLNRVQHLLYVLHXXXXXXXXXXXXXXXXXXXALTHHLSSSSSSTTSGTITFACTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPNNSRSLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSTE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107517g00001 221 MobiDBLite consensus disorder prediction 47 62 - -
Trme107517g00001 221 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 66 217 IPR005202 -
Trme107517g00001 221 Pfam GRAS domain family 67 218 IPR005202 -
Trme107517g00001 221 ProSiteProfiles GRAS family profile. 57 221 IPR005202 -
Trme107517g00001 221 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107517g00001 Trme-Chr107517 2 665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107517g00001 29 216 GRAS Transcription Factor Family AT3G13840 52.381 1.12e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme107517g00001 GRAS 7.6e-27 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107517g00001 - - mtr:11434050 308.916