Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10747g00001 ATGCTTCTTTTTGACGCATTGTCTGCACGGATCCGCGTCGTTAAAATCAGAGGAAGGTCTATGCAATGTGAAGCTTGTGGAGAAAAGGCAACATTTAATCAGCAGTACTTCCGAGAATTTGATTATGAGAACTTCACTCAGACTCCCTTGTGCGTGCCTCCTTTGAAGTTAAATCTAATTCCTAGTGAATCAAGAATCAGCAGCAAGGAGTACAACGAAATAATTGTCAACAAGGAACCACATGTGTTGGTTGATGTTAGACCAGCTCACCATTTCAAGATTGTGTCACTTCCAAATTCTTTGAACATTCCATTCTCAACTTTAGAGTCTAGGTTGCCGGAAATATCGTCAATTTTGAAGAAAGATGAAGAGGAAAAAGGCGTGGTTTCTGAATCAAGTGCACGATTATATGTAGTATGCAGAAGGGGAAATGACTCTCAAAGGGCTGTTCAATACCTTCACAAAATGGGTTTTACTTCTGCTAAGGATATTGTTGGGGGCTTGGAGTCTTGGGCTCAAAATGTTGATCCTAACTTCCCTACTTATTAG 549 0.4044 MLLFDALSARIRVVKIRGRSMQCEACGEKATFNQQYFREFDYENFTQTPLCVPPLKLNLIPSESRISSKEYNEIIVNKEPHVLVDVRPAHHFKIVSLPNSLNIPFSTLESRLPEISSILKKDEEEKGVVSESSARLYVVCRRGNDSQRAVQYLHKMGFTSAKDIVGGLESWAQNVDPNFPTY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10747g00001 182 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 51 177 IPR036873 -
Trme10747g00001 182 Gene3D - 64 182 IPR036873 -
Trme10747g00001 182 SMART rhod_4 67 177 IPR001763 -
Trme10747g00001 182 PANTHER FAD-DEPENDENT OXIDOREDUCTASE 61 179 - -
Trme10747g00001 182 ProSiteProfiles Rhodanese domain profile. 77 180 IPR001763 -
Trme10747g00001 182 CDD RHOD_ThiF 57 182 - -
Trme10747g00001 182 Pfam Rhodanese-like domain 69 173 IPR001763 -
Trme10747g00001 182 FunFam Adenylyltransferase and sulfurtransferase MOCS3 64 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10747g00001 Trme-Chr10747 412 1560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10747g00001 1 182 Sulfurtransferasese or Rhodanese AT5G55130 65.027 2.23e-83 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10747g00001 K11996 - gmx:100801820 318.546