Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107230g00001 ATGGATATAGATGCTGCAAGTATTCAGCCAGTAGTAGATACTGGAAGCAAGCAAGATTCAGTGAAGAACAAAGCTAAAGATGAAAAAACCAATACAGTACCTTTATACAAGCTTTTCTCATTTGCTGATTCTTTGGATCATTTATTGATGTTTGTTGGGACTATTGGTGCTATTGGGAATGGAATCTCCATGCCTTTGATGACTTTAATATTTGGAAATATGATTAATGCATTTGGTGGATCATCAAGCACCAAAGAAGTTGTTGATGAAGTTTCTAAGGTGTCCTTGAAATTCGTATACTTGGCTGCGGGTACATTTGTTGCATCTCTTTTGC 334 0.3653 MDIDAASIQPVVDTGSKQDSVKNKAKDEKTNTVPLYKLFSFADSLDHLLMFVGTIGAIGNGISMPLMTLIFGNMINAFGGSSSTKEVVDEVSKVSLKFVYLAAGTFVASLL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107230g00001 111 SUPERFAMILY ABC transporter transmembrane region 37 109 IPR036640 GO:0005524|GO:0016020
Trme107230g00001 111 Gene3D ABC transporter type 1, transmembrane domain 28 111 IPR036640 GO:0005524|GO:0016020
Trme107230g00001 111 PANTHER ABC TRANSPORTER B FAMILY 16 110 IPR039421 -
Trme107230g00001 111 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107230g00001 Trme-Chr107230 37 587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107230g00001 21 110 Calmodulin-binding Proteins AT2G36910 35.165 1.90e-13 63.2