Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107100g00001 ATGGCGGCTACTGTATCTGCTTGGTCCAAACCAGGTGCATGGGCACTTGATTCTGAGGAACACGAAGCTGAACTCCTTCAAAACAACAACAACAACNNNNNNNNNAACAACAACAACAACGTTGTTGAATCCAAACCACTCGCTGAATTCCCTTCTCTCGCTGTCGCCGCCGCAACAAAACCCAAAAAGAAGAAAACTCAAACCCTATCTTTGGCCGAATTCACTGCCAAACCGGTTTCTTCATTCACTCATCAAGATCCGGTTGATCTTCCAACCGGTCCACGTCAGCGAACCGCTGAGGAACTCGAACGTGACCGGACTCGTATTGGTGGTGGATTTGGATCTTACGGTGGTGGTCGTTCTAATCGGAATTCGGGGGATGATGAATCTTCTGTTTCAAGATGGGGTTCTAATAGGGTTCCGAGAAACGATTCGTTTGGTTCTGATAGAAGGGATAGGGATTCGAATCGTGAACCTTCTAGGGCTGATGAAATTGATAATTGGGCTGCTGCTAAGAAACCTTCCGTTGGGAATGG 536 0.4664 MAATVSAWSKPGAWALDSEEHEAELLQNNNNNXXXNNNNNVVESKPLAEFPSLAVAAATKPKKKKTQTLSLAEFTAKPVSSFTHQDPVDLPTGPRQRTAEELERDRTRIGGGFGSYGGGRSNRNSGDDESSVSRWGSNRVPRNDSFGSDRRDRDSNREPSRADEIDNWAAAKKPSVGNG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107100g00001 179 Coils Coil 16 32 - -
Trme107100g00001 179 MobiDBLite consensus disorder prediction 118 143 - -
Trme107100g00001 179 MobiDBLite consensus disorder prediction 73 179 - -
Trme107100g00001 179 Coils Coil 36 38 - -
Trme107100g00001 179 MobiDBLite consensus disorder prediction 73 87 - -
Trme107100g00001 179 Pfam Plant specific eukaryotic initiation factor 4B 7 175 IPR010433 GO:0003743
Trme107100g00001 179 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 175 IPR010433 GO:0003743
Trme107100g00001 179 MobiDBLite consensus disorder prediction 144 168 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107100g00001 1 179 Eukaryotic Initiation Factors Gene Family AT4G38710 52.105 1.81e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme107100g00001 - - pvu:PHAVU_011G033300g 203.756