Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme107038g00001 ATGGGTAAGACGAAAAAGAAGAGAAGTAGGGTTTCCGTTTCCGACGACGATGATGAAGAAATCGGATCTGATAATATCAATAACGACGCTTCCGATCAAAACCAAAACTCTCTCTACCAGGTTCTTGGTGTCGAAAAAACAGCATCTCAACAAGAAATAAAGAAGGCATATCACAAATTGGCGTTGAGACTTCATCCTGATAAGAATCCTGGTGACGAG 219 0.411 MGKTKKKRSRVSVSDDDDEEIGSDNINNDASDQNQNSLYQVLGVEKTASQQEIKKAYHKLALRLHPDKNPGDE 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme107038g00001 73 ProSiteProfiles dnaJ domain profile. 37 73 IPR001623 -
Trme107038g00001 73 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 24 73 IPR042977 -
Trme107038g00001 73 MobiDBLite consensus disorder prediction 1 38 - -
Trme107038g00001 73 PRINTS DnaJ domain signature 57 72 IPR001623 -
Trme107038g00001 73 PRINTS DnaJ domain signature 39 57 IPR001623 -
Trme107038g00001 73 Gene3D DnaJ domain 20 73 IPR036869 -
Trme107038g00001 73 SUPERFAMILY Chaperone J-domain 34 73 IPR036869 -
Trme107038g00001 73 CDD DnaJ 39 73 IPR001623 -
Trme107038g00001 73 SMART dnaj_3 36 73 IPR001623 -
Trme107038g00001 73 Pfam DnaJ domain 38 72 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme107038g00001 Trme-Chr107038 132 446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme107038g00001 39 68 C2H2 Transcription Factor Family AT1G74250 53.333 5.74e-06 40.0