Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106899g00001 GTGATTACTGAGCTTTCGTCTAAGACAAGTGTTGAGGTTGATTTAGATTTGGGATATGGTTCAAAGATATGCAAGGTTGTGACACGGCAAGAGTTTGAGGACGTAAACAAAGAGGTGTTTAAGAATATAAATGATGTGATAATTGTAGGTGGATGTTGTAATATACCAATGGTGAAGAATCTTGTTACTAAAATATGCAAAGGAAAGGAAATTTATAAAGGTATGAATCCTTTGATTGCTATACTTTGTGGTGCAGCAGCAGTGGCAGGAGTTGTTGATGATGCCATTGGTAACATGGACTTGTTTACTTCTCAAGTAACACTTCATGCCATCGGAATTCGTGTTGATGGACAAAAATCCATACCTGCTATTCCGAGGAACACATCAGTGCCAACGGCATGGGATATAGTTTTCTCAACTATTAATGATAATCAAACTACGACGTTGATTGTTGTCTACAAAGGCGATGAGGAGGGACAGAAGGCCGAAGAAAACAAAGTTTTGGGAAATTTCAAAATAACTGAAATACCTAAAGCACCAAAAGGAGTTCCTGAAATCACTGTTTCCATGACCATAGACCATAGACCATCTGACCAACAATCTGCAATTCCTGTTATTGAAGAAAGAATGACAAAGTTTGATGATGGACAGAACGGTTGGCGTGA 665 0.385 VITELSSKTSVEVDLDLGYGSKICKVVTRQEFEDVNKEVFKNINDVIIVGGCCNIPMVKNLVTKICKGKEIYKGMNPLIAILCGAAAVAGVVDDAIGNMDLFTSQVTLHAIGIRVDGQKSIPAIPRNTSVPTAWDIVFSTINDNQTTTLIVVYKGDEEGQKAEENKVLGNFKITEIPKAPKGVPEITVSMTIDHRPSDQQSAIPVIEERMTKFDDGQNGWR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106899g00001 221 Gene3D - 76 89 - -
Trme106899g00001 221 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 104 194 IPR029047 -
Trme106899g00001 221 PRINTS 70kDa heat shock protein signature 183 199 - -
Trme106899g00001 221 PRINTS 70kDa heat shock protein signature 100 119 - -
Trme106899g00001 221 PRINTS 70kDa heat shock protein signature 43 59 - -
Trme106899g00001 221 PRINTS 70kDa heat shock protein signature 75 95 - -
Trme106899g00001 221 SUPERFAMILY Actin-like ATPase domain 4 91 IPR043129 -
Trme106899g00001 221 Gene3D Actin; Chain A, domain 4 4 41 - -
Trme106899g00001 221 Pfam Hsp70 protein 26 194 IPR013126 GO:0005524|GO:0140662
Trme106899g00001 221 Gene3D - 42 75 - -
Trme106899g00001 221 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 90 196 IPR029047 -
Trme106899g00001 221 PANTHER HEAT SHOCK PROTEIN 70KDA 4 195 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme106899g00001 Trme-Chr106899 3 667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106899g00001 6 193 Calmodulin-binding Proteins AT3G12580 35.407 3.29e-32 121