Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106842g00001 ATGTTCATTGACCAGGATGAAATAAAGGATCAAGGTAATGTTGTTGAATCGACACGAACCGAATTAGGGTCCGAAGATTCGCTGAAGACAGATTCCAAAAGAAAAAGAAAATCACGAAAGAAAAGCCGAGATATGGACAGCAATGATTTGAGTGCAACTTTGAAATCTGAAGTCACACATAATCAGCATTCAAATCAACAATCAAGAGATAATATAGATTTGGACAAGATTATGGAAGATTTTTGTCAAATTGAACGTGCTTGTTCCTTGATGCATGATGACGATGATAGCAAAGTTCTTGCTCAATCAAACCAAAAGAATATCAATTCTGAAGAACTTGCAAGAGATGCAATTCATGATTTTGTGAATCAGATGATATTGAATGGGAAAGATATGGTAGAAGATAAAAAATTCCTTTGCTCTCACGAACTCATGGAAACACTTCAGGTTATAAGCTCGGATAAGGAATTGTTTCTAAAACTTCTACAAGATCCAAATTCCCACTTACTGAGATATATTCAGGAGTTGGAAAATGCTCAAGGGAGAAGTGAAAAAGAATACAATTCTG 568 0.3521 MFIDQDEIKDQGNVVESTRTELGSEDSLKTDSKRKRKSRKKSRDMDSNDLSATLKSEVTHNQHSNQQSRDNIDLDKIMEDFCQIERACSLMHDDDDSKVLAQSNQKNINSEELARDAIHDFVNQMILNGKDMVEDKKFLCSHELMETLQVISSDKELFLKLLQDPNSHLLRYIQELENAQGRSEKEYNS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106842g00001 189 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 186 - -
Trme106842g00001 189 MobiDBLite consensus disorder prediction 51 68 - -
Trme106842g00001 189 MobiDBLite consensus disorder prediction 1 72 - -
Trme106842g00001 189 Pfam Protein of unknown function (DUF3741) 123 167 IPR022212 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106842g00001 62 165 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.962 2.15e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106842g00001 - - gmx:100783243 238.424