Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106812g00001 ATGGACGCACTGTTCAAACCAATAGAAAATTTGATTCTCATGATGGATATGGTGCCGCCTGAAACAATGAACAAACTTCATGAAATGGCAAAGTTGATGGTGAGCACTGNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCCGGAGGGAATGGTTGGAGGGCCTAATGAAACAATTATTAGGTTTAGAAAATCTTACTATTGAGGACGTTAACAAGATTTCATGGAATGATCTTAAACACCAGATTAGAAGTTGGATTAAGGCTTCAAAGGTCGCTCTCAAGATATTGTTCCCCATCGAGCGACGACTCTGCGATCTTGTTTTCTTCGGATTCTCCACAGTCGCCAATCTCTCCTTCACAGAG 369 0.3767 MDALFKPIENLILMMDMVPPETMNKLHEMAKLMVSTXXXXXXXXXXXXXRREWLEGLMKQLLGLENLTIEDVNKISWNDLKHQIRSWIKASKVALKILFPIERRLCDLVFFGFSTVANLSFTE 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106812g00001 123 SUPERFAMILY Cullin repeat-like 12 123 IPR016159 -
Trme106812g00001 123 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 123 IPR004140 GO:0000145|GO:0006887
Trme106812g00001 123 Gene3D Exocyst complex component Exo70 2 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme106812g00001 Trme-Chr106812 167 535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106812g00001 6 123 EXO70 exocyst subunit family AT5G58430 49.153 3.10e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106812g00001 K07195 - psat:127118479 119.783