Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106792g00001 ATGGAAAACGACACCACCGCCACCAACAACGCCGCCGCAACCAACGCCACGCCCAAACTTGCTTCAGGCGGAGTCAAATCCAACAACCACATCAATGAAGAAGAACATTCCAATTTGAATAGCGAGGAAAATTTACCAGAAAAAACGGAAGAAAAAATCGAAGATGAAAACGAAGAGGAACAACAACCAACTGGATCTGAAACCACCGCTCAACAACCTTCTAGAACGCCTTTCACTAATCTCAGCCAGGTCGATGCTGACCTTGCCCTCGCTCGTACCCTTCAAGAGCAG 291 0.4777 MENDTTATNNAAATNATPKLASGGVKSNNHINEEEHSNLNSEENLPEKTEEKIEDENEEEQQPTGSETTAQQPSRTPFTNLSQVDADLALARTLQEQ 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106792g00001 97 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 31 97 IPR043312 -
Trme106792g00001 97 MobiDBLite consensus disorder prediction 1 28 - -
Trme106792g00001 97 MobiDBLite consensus disorder prediction 1 97 - -
Trme106792g00001 97 MobiDBLite consensus disorder prediction 29 51 - -
Trme106792g00001 97 MobiDBLite consensus disorder prediction 63 83 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106792g00001 64 97 C3H Transcription Factor Family AT3G19910 60.000 2.58e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106792g00001 K19045 - gmx:100787418 84.3445