Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1067841g00001 ATGGCACCAAAAGCTACCAAAGCCGAGAAGAAGCAAAACTATGATACCAAACTGTGCCAGCTTCTAGATGAATTTACTCAGATTCTTGTTGTTAATGCTGATAATGTTGGATCTAACCAGCTTCAGAGTATCCGAAGTGGTCTTCGTGGTGATTCCGTTGTTCTTATGGGGAAGAACACTATGATGAAAAGATCTGT 197 0.4061 MAPKATKAEKKQNYDTKLCQLLDEFTQILVVNADNVGSNQLQSIRSGLRGDSVVLMGKNTMMKRSV 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1067841g00001 66 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 65 - -
Trme1067841g00001 66 Gene3D - 5 66 IPR043141 -
Trme1067841g00001 66 Pfam Ribosomal protein L10 7 65 IPR001790 -
Trme1067841g00001 66 SUPERFAMILY Ribosomal protein L10-like 8 65 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1067841g00001 Trme-Chr1067841 1 197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1067841g00001 4 66 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 87.302 3.43e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1067841g00001 K02941 - sly:101261521 114.775