Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme106783g00001 | CATACGTCTCCTACTCGAAGTCCAACTGATGAGAAGGATGATGCTGAAGATGAAGATGATGTTCAATGGCAAACAGACACATCACTAGAGGCTGCTCGACAAAGAATTCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAACTGAACCAGAGAAGGAGAAAGCAACCCATAAAGTAAGTGATAATCCTGGTAATGGTAACTCCATGAACTACAAAACTCTGGTTGGTGAACTCAAAGCTGATTTGGAGAAAGGTGCTTCAGCTAAAGAATTGGTGGCCCATTGGGCATCACTTCCTGTCACTCCACAAGAAAAGATGAGTGCTCTGTATGAAGCCCTATTTGGGGACATTGAGAAAGSATTTGCAAAAGAAGCAATTAAGAAGAAGAGCTACCTTGCTGCTGCAGTTGCTGAGGAGGAGGGTATRCCGTTGCTGCTGCTGCGTGCAATTGAGGAATTTTCTTTGAAGTCCACTTCCTCTGCACTTAAGGAGGTTGCCCTGGTTCTGAAGGCACTCTACGATGCTGATGCGCTGGAGGAAGAACACATAATGCAATGGTATCAAGAAGGGCTGAAAAGCGACAACAATAACTCTCAGATTTGGAAGAACGTTAAACCCTTCATTGAGTGGCTTCAGAGTGCAGAATCAGAG | 666 | 0.4459 | HTSPTRSPTDEKDDAEDEDDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTTEPEKEKATHKVSDNPGNGNSMNYKTLVGELKADLEKGASAKELVAHWASLPVTPQEKMSALYEALFGDIEKXFAKEAIKKKSYLAAAVAEEEGXPLLLLRAIEEFSLKSTSSALKEVALVLKALYDADALEEEHIMQWYQEGLKSDNNNSQIWKNVKPFIEWLQSAESE | 222 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme106783g00001 | 222 | SMART | 542_3 | 134 | 222 | IPR003307 | GO:0005515 | |
Trme106783g00001 | 222 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 12 | 222 | IPR045196 | GO:0003743|GO:0006413 | |
Trme106783g00001 | 222 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 151 | 222 | IPR003307 | GO:0005515 | |
Trme106783g00001 | 222 | Gene3D | - | 70 | 217 | - | - | |
Trme106783g00001 | 222 | ProSiteProfiles | W2 domain profile. | 66 | 222 | IPR003307 | GO:0005515 | |
Trme106783g00001 | 222 | MobiDBLite | consensus disorder prediction | 25 | 48 | - | - | |
Trme106783g00001 | 222 | SUPERFAMILY | ARM repeat | 75 | 220 | IPR016024 | - | |
Trme106783g00001 | 222 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme106783g00001 | Trme-Chr106783 | 1 | 666 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme106783g00001 | 3 | 219 | Eukaryotic Initiation Factors Gene Family | AT1G36730 | 52.361 | 4.99e-63 | 200 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme106783g00001 | K03262 | - | gmx:100778073 | 284.263 |