Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106783g00001 CATACGTCTCCTACTCGAAGTCCAACTGATGAGAAGGATGATGCTGAAGATGAAGATGATGTTCAATGGCAAACAGACACATCACTAGAGGCTGCTCGACAAAGAATTCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAACTGAACCAGAGAAGGAGAAAGCAACCCATAAAGTAAGTGATAATCCTGGTAATGGTAACTCCATGAACTACAAAACTCTGGTTGGTGAACTCAAAGCTGATTTGGAGAAAGGTGCTTCAGCTAAAGAATTGGTGGCCCATTGGGCATCACTTCCTGTCACTCCACAAGAAAAGATGAGTGCTCTGTATGAAGCCCTATTTGGGGACATTGAGAAAGSATTTGCAAAAGAAGCAATTAAGAAGAAGAGCTACCTTGCTGCTGCAGTTGCTGAGGAGGAGGGTATRCCGTTGCTGCTGCTGCGTGCAATTGAGGAATTTTCTTTGAAGTCCACTTCCTCTGCACTTAAGGAGGTTGCCCTGGTTCTGAAGGCACTCTACGATGCTGATGCGCTGGAGGAAGAACACATAATGCAATGGTATCAAGAAGGGCTGAAAAGCGACAACAATAACTCTCAGATTTGGAAGAACGTTAAACCCTTCATTGAGTGGCTTCAGAGTGCAGAATCAGAG 666 0.4459 HTSPTRSPTDEKDDAEDEDDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTTEPEKEKATHKVSDNPGNGNSMNYKTLVGELKADLEKGASAKELVAHWASLPVTPQEKMSALYEALFGDIEKXFAKEAIKKKSYLAAAVAEEEGXPLLLLRAIEEFSLKSTSSALKEVALVLKALYDADALEEEHIMQWYQEGLKSDNNNSQIWKNVKPFIEWLQSAESE 222
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme106783g00001 222 SMART 542_3 134 222 IPR003307 GO:0005515
Trme106783g00001 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 12 222 IPR045196 GO:0003743|GO:0006413
Trme106783g00001 222 Pfam eIF4-gamma/eIF5/eIF2-epsilon 151 222 IPR003307 GO:0005515
Trme106783g00001 222 Gene3D - 70 217 - -
Trme106783g00001 222 ProSiteProfiles W2 domain profile. 66 222 IPR003307 GO:0005515
Trme106783g00001 222 MobiDBLite consensus disorder prediction 25 48 - -
Trme106783g00001 222 SUPERFAMILY ARM repeat 75 220 IPR016024 -
Trme106783g00001 222 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme106783g00001 Trme-Chr106783 1 666 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106783g00001 3 219 Eukaryotic Initiation Factors Gene Family AT1G36730 52.361 4.99e-63 200
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106783g00001 K03262 - gmx:100778073 284.263