Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1067742g00001 ATGCAACTCTTGGAGAGTGGTTTGAAGGTGAAGGAGTATGAACTTCTCAGAAGGAACTTCAGTGATACCGGATGTTTCGGCTTTGGAATTCAGGAGCACATTGATTTGGGAATCAA 116 0.431 MQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGI 38
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1067742g00001 38 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 38 IPR002132 GO:0003735|GO:0005840|GO:0006412
Trme1067742g00001 38 Gene3D - 1 38 IPR022803 -
Trme1067742g00001 38 SUPERFAMILY RL5-like 2 36 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1067742g00001 Trme-Chr1067742 23 138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1067742g00001 1 38 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 100.000 9.21e-23 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1067742g00001 K02868 - atri:130802715 80.8777