Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106587g00001 CCTGAGACCGCGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAGAAGGAGTCTACAATAAATTCAAATAAGGAATCTGCGGATGATGCTGGTGTAGACCAAACTGGTACGCGTGCAGTGCTACAAGAGAAAGAAAGGGAGCTGGAACTACTTATCCGTGATTTGGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCGTCAGCAGGAAAGACTGCTGGTTTTTCTGATAGGCCACCGTCTCGTTCTGGCTCNTTTGAGGATTCTAGAAGTGTGGATTTTACGGACCGACCTCGATCCCGTGGTACAGGAGATATGTCGATGCGTCCTACTGATGACAGAAGACAATTTCAAGGTAGCAAGGAAAGAGGGTGGTTTGCGAACAGCAGAGACTTGAATAGGTGA 435 0.446 PETAEEKLLKEEIDNLKKELEKESTINSNKESADDAGVDQTGTRAVLQEKERELELLIRDLDDKVRFGQKAVERPGSSAGKTAGFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMSMRPTDDRRQFQGSKERGWFANSRDLNR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106587g00001 144 MobiDBLite consensus disorder prediction 20 48 - -
Trme106587g00001 144 Coils Coil 3 33 - -
Trme106587g00001 144 MobiDBLite consensus disorder prediction 99 130 - -
Trme106587g00001 144 Pfam Plant specific eukaryotic initiation factor 4B 1 134 IPR010433 GO:0003743
Trme106587g00001 144 MobiDBLite consensus disorder prediction 69 144 - -
Trme106587g00001 144 Coils Coil 44 64 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106587g00001 1 144 Eukaryotic Initiation Factors Gene Family AT1G13020 55.172 5.68e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106587g00001 - - gmx:100784238 243.047