Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106571g00001 CCAGGGATTTTGATACCAGAGGCATTAGGGTTAGGCAATTGGGTAAAAGCACAAGAATGGGCAGCACTTCCTGGTGGACAAGCAACCTACCTAGGCAACCCTGTTCCATGGGGTACCCTACCTACCATTTTGGTCATTGAATTCCTTTCTATTGCTTTTGTTGAGCACCAAAGGAGTATGGAGAAAGACCCTGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGTTACTCTAAAGACCCTAAAAAGTTCCATGAATACAAAATCAAAGAAGTTAAGAATGGTAAGTAA 297 0.4276 PGILIPEALGLGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEVKNGK 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106571g00001 98 Pfam Chlorophyll A-B binding protein 2 97 IPR022796 -
Trme106571g00001 98 SUPERFAMILY Chlorophyll a-b binding protein 2 98 - -
Trme106571g00001 98 Gene3D Chlorophyll a/b binding protein domain 1 98 - -
Trme106571g00001 98 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 98 IPR001344 GO:0009765|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106571g00001 1 98 Chloroplast and Mitochondria Gene Families AT3G54890 90.816 2.35e-62 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106571g00001 K08907 - fve:101299419 204.912