Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1064930g00001 ATGCTTACTAGAGATATAGCAGAAACTGATAAGTTTCTTATATTTGCTTCTGATGGACTTTGGGAGCTCATGACAAATGACCAAGCAGTTCAAATTGTTCATAAGAATCCAAGAAAT 117 0.3419 MLTRDIAETDKFLIFASDGLWELMTNDQAVQIVHKNPRN 39
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1064930g00001 39 Gene3D - 1 39 IPR036457 -
Trme1064930g00001 39 Pfam Protein phosphatase 2C 3 36 IPR001932 -
Trme1064930g00001 39 SUPERFAMILY PP2C-like 4 35 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1064930g00001 Trme-Chr1064930 54 170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1064930g00001 3 38 PP2C-type Phosphatase Gene Family AT5G06750 69.444 6.94e-13 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1064930g00001 K01102 - sspl:121801210 59.6918