Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme1064625g00001 | GAGGTGGGTTCAAATGTTAGCAAGTTCAGTGTGGGAGAAATTGTGGGAGTTGGACTTCTGGTTGGTTGCTGCAAAAGTTGTAGGGCTTGTGATTCTGAGATTGAGCAATACTGTAACAAGAAGATCTGGTCTTACAATGATGTTTATGCCGACGGAAAAGTCACTCAGGGTGGATTTGCTGAAGCTACTGTCGTTGAACAGAAGTAA | 207 | 0.4348 | EVGSNVSKFSVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYADGKVTQGGFAEATVVEQK | 68 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme1064625g00001 | 68 | Gene3D | - | 1 | 67 | - | - | |
| Trme1064625g00001 | 68 | PANTHER | ALDEHYDE REDUCTASE | 1 | 68 | IPR047109 | GO:0016616 | |
| Trme1064625g00001 | 68 | Pfam | Alcohol dehydrogenase GroES-like domain | 1 | 67 | IPR013154 | - | |
| Trme1064625g00001 | 68 | SUPERFAMILY | GroES-like | 1 | 66 | IPR011032 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme1064625g00001 | Trme-Chr1064625 | 3 | 209 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme1064625g00001 | 1 | 68 | Monolignol Biosynthesis Gene Families | AT3G19450 | 72.059 | 1.82e-22 | 85.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme1064625g00001 | K00083 | - | cit:102607276 | 107.071 |