Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106376g00001 TATGTTGTGAAGAACAATGTGGGCAGAGAGTTTGTAGCGGGTGGATTTGGAGGCACAGCCGGTATCATCACGAGTTATCCATTCGATACTCTTCGCGTCATGCAACAACAGTCCGGCAATGCTTCTGCCATCGGCATCCTCAAAAATTTGTTGGCTAAGGAAGGACCAACTGCTCTGTACCGTGGCATGGCTGTTCCTTTGGCATCAGTTGGTTTTCAAGTTT 223 0.4798 YVVKNNVGREFVAGGFGGTAGIITSYPFDTLRVMQQQSGNASAIGILKNLLAKEGPTALYRGMAVPLASVGFQV 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106376g00001 74 SUPERFAMILY Mitochondrial carrier 6 71 IPR023395 -
Trme106376g00001 74 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 7 73 - -
Trme106376g00001 74 Pfam Mitochondrial carrier protein 6 68 IPR018108 -
Trme106376g00001 74 Gene3D Mitochondrial carrier domain 3 74 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme106376g00001 Trme-Chr106376 447 669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106376g00001 5 73 Antiporters AT1G79900 67.143 4.37e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106376g00001 K15109 - gmx:100801221 96.6709