Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106358g00001 GGTGAAATTTGGAACAGAGGATACTATAGATGTAGCAGTTCAAAGAGTTGCCCAGCGAGAAAACAAGTAGAAAGGAACCATGTGGACCCCACCGTGCTTCTTGTAACATACACTTCCGATCACAACCACGCCGTGCCGGCACCTAGAAACTACCGAAACACAAGCAACGCCGCCGCATCAAACAAAGACTCCGAATCAGAACAAGAACCAGAAACAGAACCGGAGGAAAGGTTTACAGATCTTGGTGAGGAGCCGTTGATCTCCCCTACGGATGAGTTAGGCGGATGGTTGGGAGAAGTGGATGCGATCGCGTCACCGGCGGGTCTGGAATGTCCGATTTTCTCGGAGCAGGAAGTTTCGATGTTGGGAGAAGAGGAGATGTCGTTGTTCGCGGATCTMGGWGAGTTGCCGGAGTGTTCGCCGGTGTTTTGGAGAGGGMRGAGGAGTAGCGGCGGTGCTGGCGATGTTAGTGTGGGACCACTTGTTGAGGCAAATTGCTCCTTGTGA 507 0.5187 GEIWNRGYYRCSSSKSCPARKQVERNHVDPTVLLVTYTSDHNHAVPAPRNYRNTSNAAASNKDSESEQEPETEPEERFTDLGEEPLISPTDELGGWLGEVDAIASPAGLECPIFSEQEVSMLGEEEMSLFADLGELPECSPVFWRGXRSSGGAGDVSVGPLVEANCSL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106358g00001 168 SUPERFAMILY WRKY DNA-binding domain 3 46 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme106358g00001 168 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 141 IPR044810 GO:0003700
Trme106358g00001 168 Gene3D WRKY domain 1 47 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme106358g00001 168 SMART WRKY_cls 1 45 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme106358g00001 168 ProSiteProfiles WRKY domain profile. 1 46 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme106358g00001 168 MobiDBLite consensus disorder prediction 48 63 - -
Trme106358g00001 168 MobiDBLite consensus disorder prediction 37 93 - -
Trme106358g00001 168 Pfam WRKY DNA -binding domain 5 43 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme106358g00001 Trme-Chr106358 163 669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106358g00001 1 143 WRKY Transcription Factor Family AT1G29280 42.138 6.62e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trme106358g00001 WRKY 4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106358g00001 - - mtr:25486010 261.151